Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914960.1_cds_XP_016464891.1_57890
CDS Infomation

[gene=LOC107787799] [db_xref=GeneID:107787799] [protein=glycerol-3-phosphate dehydrogenase SDP6, mitochondrial-like isoform X2] [protein_id=XP_016464891.1] [location=join(27612..27975,30806..31279,31797..32128,33738..33898,34741..34999,35889..36185)] [gbkey=CDS]
Sequence

ATGGCCACCTCCATTCGCCTCCGTCGTCTCGGCGCTATCGCCGTCGTAGCCGGCGGAGCA
TACACAATTGTACGGAATCCTTCATTCTCATCAAACGACCGCGGCGATAAGTCCACCGCA
CTCGACACCTTCCGCCGGAAAATTGCTGATCCTTTCGCCGTCGTTCCGTCTCGAGCCACT
CAGGAAGCGTCTCTGATCGGCTCCAGCTTGTCTAATCCTCTCGACATCCTTGTTGTCGGC
GGCGGTGCCACCGGCTGTGGTGTCGCACTTGATGCTGCAACGCGTGGGCTCCGTGTTGGC
CTTGTCGAACGAGATGATTTTTCTTCTGGCACTTCTTCAAGGTCCACTAAGTTAATTCAT
GGAGGAGTTCGCTATTTGGAGAAAGCATTTTTCAACTTAGATTACGGGCAGTTAAAGCTA
GTTTTCCATGCCCTAGAGGAGCGTAAACAGGTCATTGACAATGCTCCGCACCTTTGTCAT
GCTTTACCATGCATGACTCCTTGTTTTGATTGGTTTGAAGCGATCTACTACTGGGCCGGC
CTGAAAATGTATGATCTGGTCGCAGGGCGACACCTACTGCATTTGTCTAGGTATTACTCT
GCACAAGAGTCGGTTGAATTGTTTCCTACCCTCGCACGAAATGGTAAAGATAAAACTCTG
AAGGGAACTGTGGTATATTATGATGGACAAATGAACGACTCGCGCCTCAATGTTGCAATA
GCATGCTCTGCTGCTTTGGCTGGTGCAGCAGTGCTTAACCATGCAGAGGTTGTATCCCTT
CTCAAAGATGAGGGTGATGGTAGAATAATTGGTGCACGTATTCGGAACAACTTGTCAGGT
AAGGAGTTTGATGCATATGCAAAAGTTGTTGTTAATGCTGCTGGGCCCTTTTGTGATGCT
GTACGGAAGTTGGCTGATAAAGATGCAAAACCCATGATCTGTCCCAGTAGTGGTGTTCAT
GTTGTACTTCCTGATTACTATTCTCCAGAAGGAATGGGCTTAATTGTCCCTAAAACTAAG
GATGGTCGAGTGGTCTTTATGCTTCCATGGTTGGGTAGAACAGTAGCTGGTACTACTGAT
TCAAACACCAGCATAACGATGCTGCCAGAACCTCATGAGAATGAGATCGAATTCATTTTG
GATGCCATCTCTGATTATCTTAATGTTAAGGTACGGCGTACTGATGTCCTATCTGCTTGG
AGTGGTATCCGCCCTCTAGCAATTGATCCCAAGGCAAAGAGTACAGAGAGCATCTCCAGA
GATCATGTTGTCGCTGAAGAGCATCCTGGTTTGGTGACAATTACTGGTGGAAAATGGACT
ACATATAGAAGCATGGCAGAAGATGCGGTTGATGCGGCTGTAAAATCTGGAAAATTGAAC
CCAGCGAATAAATGCTTGACATACAACCTACAACTTATAGGTGCAGATGGATGGGAACCT
GCATCTTTTACGATACTTGCTCAACAGTATGTCCGCATGAAAAGGTCACGTGGAGGAAAG
GTTGTTCCAGGAGTGATGGACACCGCTGCCGCTAAACATCTATCTCATGCATATGGTGCT
TTGTCTGAACGAGTGGCTGCTATTGCTCAGAACGAAAATTTGGGAAAACGACTGGCACAT
GGATACCCTTTCTTGGAAGCTGAGGTTGCCTACTGTGCTCGGGAAGAGTACTGTGAATCC
GCTGTAGATTTTGTAGCTAGAAGATGTCGTCTTGCCTTCCTCGACACTGATGCTGCACAG
CGAGCACTGCCACGAATAATAGAGATACTGGCTGCAGAGCACAAATGGGACAGGGCTAGG
CAGAAACAAGAGTTGCAGAAGGGAAAACAATTTTTAGAAACTTTCAAGTCATCAAAAAAT
GCACAATTCCATGACGGGAAGCACTAG

Peptide Sequence

PEP ID

XP_016464891.1
PEP Infomation

PREDICTED: glycerol-3-phosphate dehydrogenase SDP6, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MATSIRLRRLGAIAVVAGGAYTIVRNPSFSSNDRGDKSTALDTFRRKIADPFAVVPSRAT
QEASLIGSSLSNPLDILVVGGGATGCGVALDAATRGLRVGLVERDDFSSGTSSRSTKLIH
GGVRYLEKAFFNLDYGQLKLVFHALEERKQVIDNAPHLCHALPCMTPCFDWFEAIYYWAG
LKMYDLVAGRHLLHLSRYYSAQESVELFPTLARNGKDKTLKGTVVYYDGQMNDSRLNVAI
ACSAALAGAAVLNHAEVVSLLKDEGDGRIIGARIRNNLSGKEFDAYAKVVVNAAGPFCDA
VRKLADKDAKPMICPSSGVHVVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTD
SNTSITMLPEPHENEIEFILDAISDYLNVKVRRTDVLSAWSGIRPLAIDPKAKSTESISR
DHVVAEEHPGLVTITGGKWTTYRSMAEDAVDAAVKSGKLNPANKCLTYNLQLIGADGWEP
ASFTILAQQYVRMKRSRGGKVVPGVMDTAAAKHLSHAYGALSERVAAIAQNENLGKRLAH
GYPFLEAEVAYCAREEYCESAVDFVARRCRLAFLDTDAAQRALPRIIEILAAEHKWDRAR
QKQELQKGKQFLETFKSSKNAQFHDGKH

Transcript Sequence

Gene sequence data has not been registered.